Software

R Software

SMAT – Scaled Multiple-phenotype Association Test

AclustAdjacent-Clustering functions and analysis pipeline for methylation outcome data

Geographic Ratings (zip) – Geographical Ratings with Spatial Random Effects in a Two-Part Model

pgee.mixed – Penalized GEE for Binary and Continuous Mixed Outcomes

DVX – Differential Variation and eXpression

SNP set test for Multiple Correlated Outcomes – Association testing of SNP set with multiple correlated continuous secondary outcomes

bigzph – Online Updating Proportional Hazards Test